In this page you will find the detailed the documentation of all classes, properties, data properties and individuals present in the different modules of the ENIGMA ontology.
| Ontology | Serialization | License | Description |
|---|---|---|---|
| The Enigma Core Ontology | Turtle | CC-BY 2.0. | Represent main concepts of the ENIGMA consortium and its datasets |
| The Cohort Ontology | Turtle | CC-BY 2.0. | Describe cohorts of patients |
| The Organization Ontology | Turtle | CC-BY 2.0. | Represent organizations that participate in the ENIGMA consortium |
| The Person Ontology | Turtle | CC-BY 2.0. | Represent the scientists that participate in ENIGMA working groups and projects |
| The Project Ontology | Turtle | CC-BY 2.0. | Represent projects undertaken by ENIGMA working groups |
| The Working Group Ontology | Turtle | CC-BY 2.0. | Represent working groups that participate in the ENIGMA consortium |
| The Roles Ontology | Turtle | CC-BY 2.0. | Represent roles of persons in ENIGMA projects, organizations, papers or working groups |
| The Demographic Ontology | Turtle | CC-BY 2.0. | Represent demographics for cohort datasets |
| The Disorder Ontology | Turtle | CC-BY 2.0. | Represent mental health disorders for cohort datasets |
| The Medication Ontology | Turtle | CC-BY 2.0. | Represent medications for cohort datasets |
| The Psychopathology Ontology | Turtle | CC-BY 2.0. | Represent psychopathology information for cohort datasets |
| The Scores Ontology | Turtle | CC-BY 2.0. | Represent questionnaire and test scores for cohort datasets |
curl -sH "Accept: text/turtle" -L
https://w3id.org/enigma#
curl -sH "Accept: application/rdf+xml" -L
https://w3id.org/enigma#
A | B | C | D | E | G | H | I | L | M | N | O | P | R | S | T | U | V | W |
An academic article, submitted as a result of the work in an ENIGMA project
Defined in: The Person Ontology
To specify the components of the delivery address for the object
Defined in: The Organization Ontology
Describes the age of onset of the subject's alcohol use disorder.
Defined in: The Disorder Ontology
Describes the subject's current alcohol use disorder (ie: dependence, abuse, none).
Defined in: The Disorder Ontology
Describes whether the subject's previous lifetime alcohol use disorder (ie: dependence, abuse, none) is specified.
Defined in: The Disorder Ontology
Describes whether the scale used to determine the diagnosis of alcohol use disorder (ie: SCID, ASSIST, AUDIT) is specified.
Defined in: The Disorder Ontology
Use of antidepressants at the time of scanning
Defined in: The Medication Ontology
Use of antidepressants during lifetime
Defined in: The Medication Ontology
Use of Antiepileptics at time of scanning
Defined in: The Medication Ontology
Use of Antiepileptics during lifetime
Defined in: The Medication Ontology
A mental health disorder defined by feelings of anxiety, fear, or worry
Defined in: The Cohort Ontology
Use of 2nd generation (atypical) antipsychotic at time of scanning
Defined in: The Medication Ontology
Use of 2nd generation (atypical) antipsychotic during lifetime
Defined in: The Medication Ontology
Property to describe the author of a publication in the context of an ENIGMA project
Defined in: The Person Ontology
Describes if the subject's Barratt Impulsiveness Scale total score is specified.
Defined in: The Scores Ontology
Describes the Barratt Impulsiveness Scale version that was used.
Defined in: The Scores Ontology
Describes if the Behavioral Activation System subscale score on the BIS/BAS is specified.
Defined in: The Scores Ontology
Describes whether the age of onset of the subject's Bipolar Disorder is specified.
Defined in: The Psychopathology Ontology
Describes if the subject currently has Bipolar Disorder.
Defined in: The Psychopathology Ontology
Describes the subject's current Bipolar Disorder state (ie: depressed, hypomanic, manic, eutyhmic, mixed)
Defined in: The Psychopathology Ontology
Describes whether the subject's Bipolar Disorder type (ie: type I, type II, NOS, no BD, NA) is specified.
Defined in: The Psychopathology Ontology
Describes if the subject had Bipolar Disorder during their lifetime.
Defined in: The Psychopathology Ontology
Describes whether the subject's current Bipolar Disorder stage (first episode, recurrent episodes, no BD, and NA = no information available) is specified.
Defined in: The Psychopathology Ontology
Describes whether the Behavioral Inhibition System subscale score on the BIS/BAS is specified.
Defined in: The Scores Ontology
Specifies the kinds of brain scan data collected
Defined in: The Cohort Ontology
A disease characterized by abnormal cell division and growth
Defined in: The Cohort Ontology
A subset of vascular disorders affecting the heart
Defined in: The Cohort Ontology
A subset of vascular disorders affecting blood vessels of the brain and cerebral circulation
Defined in: The Cohort Ontology
Describes the subject's Global Clinical Impression Scale's total score.
Defined in: The Scores Ontology
checksum of data file to check if there are modifications
Defined in: The Cohort Ontology
City in which a cohort is located
Defined in: The Cohort Ontology
Working groups that study clinical populations
Defined in: The Working Group Ontology
A group of individuals studied by a working group, limited by certain inclusion and exclusion criteria. Cohort Groups: COHORT_grp_NAME Example: STELLENBOCH_grp_CN for the control group Cohort Projects: COHORT_proj_NAME Example: STELLENBOCH_proj_FS for the Freesurfer project
Defined in: The Cohort Ontology
A subset of Cohort, which either forms the patient group or control group
Defined in: The Cohort Ontology
The subset of the individuals from a Cohort, which are used as samples for a specific project
Defined in: The Cohort Ontology
Concept used to represent a conflict of interest of an author in a paper
Defined in: The Project Ontology
Property that indicates who is a contributor to a project or cohort
Defined in: The Roles Ontology
Country in which a cohort is located
Defined in: The Cohort Ontology
A class used to describe covariates information for a cohort or study.
Defined in: The Cohort Ontology
Dataset in downloadable form
Defined in: The Cohort Ontology
A dataset containing information about an ENIGMA project cohort
Defined in: The Cohort Ontology
Specifies the kinds of data collected
Defined in: The Cohort Ontology
A class used to describe the demographics covariates of a cohort or study
Defined in: The Demographic Ontology
Property which states whether the diagnostic group each subject is associated with (control vs. experimental) is specified.
Defined in: The Demographic Ontology
The method used to diagnose individuals in a Cohort
Defined in: The Cohort Ontology
A disorder/disease experienced by members of a cohort
Defined in: The Cohort Ontology
A class used to describe the disorder covariates of a cohort or study
Defined in: The Disorder Ontology
Subject's education coded as categories (ie: a range from 1-5)
Defined in: The Demographic Ontology
The method used for coding the Education Category (ie: 1 = some high school, 2 = some college, 3 = some professional degree)
Defined in: The Demographic Ontology
Property to state whether subject's education in years is specified.
Defined in: The Demographic Ontology
Disorders which affect the endocrine system
Defined in: The Cohort Ontology
Defined in: The Organization Ontology
Describes if age of onset of subject's Generalized Anxiety Disorder is specified.
Defined in: The Psychopathology Ontology
Describes if the subject currently has Generalized Anxiety Disorder.
Defined in: The Psychopathology Ontology
Describes whether if the subject had Generalized Anxiety Disorder during their lifetime is specified.
Defined in: The Psychopathology Ontology
Describes if the subject's Global Assessment of Functioning scale total score is specified.
Defined in: The Scores Ontology
Specifies the kinds of genetic data collected
Defined in: The Cohort Ontology
Disorders which are inherited and caused by abnormalities in the genome
Defined in: The Cohort Ontology
Working groups dedicated to genetic analysis
Defined in: The Working Group Ontology
Defined in: The Medication Ontology
Defined in: The Psychopathology Ontology
Defined in: The Scores Ontology
Defined in: The Disorder Ontology
Describes the additional demographics defining a given cohort
Defined in: The Cohort Ontology
Describes the organization's affiliates
Defined in: The Organization Ontology
Describes the age groupings of individuals within a cohort group
Defined in: The Cohort Ontology
Describes inclusion criteria for maximum age of participants in a Cohort, CohortProject or CohortGroup
Defined in: The Cohort Ontology
Describes the mean age of the cohort
Defined in: The Cohort Ontology
Describes inclusion criteria for minimum age of participants in a Cohort, CohortProject or CohortGroup
Defined in: The Cohort Ontology
Describes the standard deviation of the age of a cohort
Defined in: The Cohort Ontology
Describes the ancestry of the participants of the cohort
Defined in: The Cohort Ontology
Describes the brain scan data types that were collected for a cohort or project
Defined in: The Cohort Ontology
Provides a brief description of the working group or project or cohort or image acquisition protocol
Defined in: The Cohort Ontology
Describes what cohorts are part of a project or working group
Defined in: The Project Ontology
Property that indicates the cohort groups part of a cohort
Defined in: The Cohort Ontology
Describes the subcohorts, specific to a given project, that are part of that cohort
Defined in: The Cohort Ontology
Describes the current status of a cohort, cohort group or cohort project
Defined in: The Cohort Ontology
Describes where the data of the cohort was collected
Defined in: The Cohort Ontology
Property linking an author with a conflict of interest that the author has on a paper
Defined in: The Project Ontology
Property that points to the person that is a contact for the project or cohort
Defined in: The Cohort Ontology
Points to a media object, like an image or video file
Defined in: The Cohort Ontology
Describes the control group of a cohort
Defined in: The Cohort Ontology
The coordinates associated with an organization
Defined in: The Organization Ontology
The country name associated with the address of the object
Defined in: The Organization Ontology
Data property that aims to capture the current job title of a person. Examples are student, faculty, staff, postdoc, etc.
Defined in: The Person Ontology
Describes the end year of the data collection period of the cohort
Defined in: The Cohort Ontology
Describes the start year of the data collection period of the cohort
Defined in: The Cohort Ontology
Describes which data processing protocol was used in a project
Defined in: The Project Ontology
Property that links a cohort project with the data being described.
Defined in: The Cohort Ontology
Describes the data types that a cohort or project collected
Defined in: The Cohort Ontology
Describes the deadline date for data contribution of a project
Defined in: The Project Ontology
Describes the date the proposal for a project was approved
Defined in: The Project Ontology
Describes the end date of the target period of the project
Defined in: The Project Ontology
Describes the start date of the target period of the project
Defined in: The Project Ontology
Describes what degree a person has (e.g., BsC, PhD, etc.)
Defined in: The Person Ontology
Description of an item
Defined in: The Cohort Ontology
Describes the patient group of a cohort
Defined in: The Cohort Ontology
Describes what instrument is used to diagnose the members of the cohort
Defined in: The Cohort Ontology
Indicates a downloadable form of a dataset at a specific location
Defined in: The Cohort Ontology
Property that indicates which is the email of a person
Defined in: The Person Ontology
Criteria used to exclude cohort patients
Defined in: The Cohort Ontology
The family name of some person.
Defined in: The Person Ontology
Describes the funding source of the cohort
Defined in: The Cohort Ontology
Describes the genetic data types that were collected for a cohort or project
Defined in: The Cohort Ontology
The given name of some person.
Defined in: The Person Ontology
Data property that aims to capture the grants that have been obtained by a person, in order to properly list them in the acknowledgements of the corresponding publication
Defined in: The Person Ontology
Criteria used to define group of cohort patients
Defined in: The Cohort Ontology
Property that describes the home page of a cohort or person
Defined in: The Cohort Ontology
Describes the acquisition protocol that was used to scan the data of a cohort
Defined in: The Cohort Ontology
Describes the specific kind/type of an organization
Defined in: The Organization Ontology
Describes the memorandum of understanding links of the working group
Defined in: The Working Group Ontology
Describes middle initial of a person
Defined in: The Person Ontology
Name of an item
Defined in: The Cohort Ontology
Describes the full name of the working group
Defined in: The Working Group Ontology
A short name for the working group, in case the working group name is too long
Defined in: The Working Group Ontology
Describing the number of females in a cohort project
Defined in: The Cohort Ontology
Describing the number of males in a cohort project
Defined in: The Cohort Ontology
Describes the number of participants in a cohort group or cohort project
Defined in: The Cohort Ontology
ORCID Id of a Person
Defined in: The Person Ontology
Describes what project someone is a data analyst of
Defined in: The Roles Ontology
Describes what project someone collected data for
Defined in: The Roles Ontology
Property designed to distinguish who collaborated in the creation of the first draft of a publication
Defined in: The Roles Ontology
Describe the investigators of a cohort
Defined in: The Cohort Ontology
Describes which cohorts somone is a main PI of
Defined in: The Cohort Ontology
Describes the principal investigator of the cohort
Defined in: The Cohort Ontology
Property that points to the person that is a contact for the project or cohort
Defined in: The Project Ontology
Describes what project someone is a project lead of
Defined in: The Roles Ontology
Describes who ran a protocol for a given cohort
Defined in: The Roles Ontology
Property that indicates who contributed to the paper reviewing the initial drafts and providing comments
Defined in: The Roles Ontology
Describes the population group of a population-based cohort
Defined in: The Cohort Ontology
The postal code associated with the address of the object
Defined in: The Organization Ontology
Describes the primary address of an organization or person
Defined in: The Organization Ontology
Describes what projects are worked on by a specific working group
Defined in: The Core Ontology
Property to link project results to a Cohort Project
Defined in: The Cohort Ontology
Describes the approved proposal form link of a project
Defined in: The Project Ontology
Property that links a project to a publication that resulted from it.
Defined in: The Project Ontology
Describes the links to published papers or the paper title (if link does not exist) for the working group
Defined in: The Working Group Ontology
The region (e.g. state or province) associated with the address of the object
Defined in: The Organization Ontology
Describes a research interest of a person
Defined in: The Person Ontology
Describes the species of the subjects of a cohort (Humans, Chimps, Mice, etc.)
Defined in: The Cohort Ontology
Property used to link a cohort with the summary statistics that may have been produced after applying a given protocol
Defined in: The Cohort Ontology
The street address associated with the address of the object
Defined in: The Organization Ontology
Describes the study design of a project (Case/control; Population; Healthy only; Patients only) NOTE: study design options are mutually exclusive for Cohort Groups but not Projects
Defined in: The Cohort Ontology
Describes the titles of the submitted papers of a working group
Defined in: The Working Group Ontology
Describes the total number of participants in the cohort
Defined in: The Cohort Ontology
Describing the number of female to male transgender individuals in a cohort group
Defined in: The Cohort Ontology
Describing the number of male to female transgender individuals in a cohort group
Defined in: The Cohort Ontology
Describes the working groups that someone is a chair of
Defined in: The Person Ontology
Describes what working group a person is a member of
Defined in: The Person Ontology
Working groups that are not disease focused
Defined in: The Working Group Ontology
Property which states if the Duration of Illness was measured in a cohort. Often abbreviated "DURILL"
Defined in: The Demographic Ontology
Procedure used to collect image data within the cohort
Defined in: The Cohort Ontology
A disease or disorder caused by the invasion of microorganisms
Defined in: The Cohort Ontology
Intelligence Quotient measured by different means
Defined in: The Demographic Ontology
The IQ scale used for each subject/group (ie: WISC-IV, WAIS-IV, WASI-II).
Defined in: The Demographic Ontology
Describes whether a project is active
Defined in: The Project Ontology
Property that indicates the cohort groups and cohort projects which are part of a cohort
Defined in: The Cohort Ontology
Property that indicates the projects which are part of a cohort group
Defined in: The Cohort Ontology
Property that indicates the cohort groups which are part of a cohort project
Defined in: The Cohort Ontology
Describes the parent organization which an organization is a part of. An organization may be part of more than one organizations.
Defined in: The Organization Ontology
Property that indicates the cohort groups specific to a project
Defined in: The Cohort Ontology
Property that indicates the cohorts which are a part of a working group
Defined in: The Cohort Ontology
Describes if a cohort's data is publicly available
Defined in: The Cohort Ontology
Use of Lithium at time of scanning
Defined in: The Medication Ontology
Lithium use during lifetime
Defined in: The Medication Ontology
Geographic location of the cohort
Defined in: The Cohort Ontology
Property which states whether subject's marital status (ie: single, married) is specified.
Defined in: The Demographic Ontology
Describes whether the age of onset of the subject's first depressive episode is specified.
Defined in: The Psychopathology Ontology
Describes if the subject currently has Major Depressive Disorder.
Defined in: The Psychopathology Ontology
Describes if the subject had Major Depressive Disorder during their lifetime.
Defined in: The Psychopathology Ontology
Describes whether the current stage of the subject's Major Depressive Disorder (ie: recurrent or first episode) is specified.
Defined in: The Psychopathology Ontology
Describes whether the subject's current number of depressive episodes is specified.
Defined in: The Psychopathology Ontology
Medication covariates describing the types of medication (lifetime/current) used by participants in each cohort
Defined in: The Medication Ontology
Disorders which can affect mood, behavior, and thinking
Defined in: The Cohort Ontology
Working groups that develop protocols (imaging or genetics)
Defined in: The Working Group Ontology
A mental health disorder defined by mood or behavioral swings
Defined in: The Cohort Ontology
Describes if the number of negative life events the subject experienced in the past 6 months is specified.
Defined in: The Psychopathology Ontology
Describes the questionnaire/interview used to assess negative life events from past 6 months (e.g. NLESS, SLESQ).
Defined in: The Psychopathology Ontology
Disorders which affect the nervous system
Defined in: The Cohort Ontology
Property which states whether subject's occupation is specified.
Defined in: The Demographic Ontology
Describes whether the age of onset of the subject's Obsessive Compulsive Disorder is specified.
Defined in: The Psychopathology Ontology
Describes if the subject currently has Obsessive Compulsive Disorder.
Defined in: The Psychopathology Ontology
Describes if the subject had Obsessive Compulsive Disorder during their lifetime.
Defined in: The Psychopathology Ontology
Disorder characterized by decreased mental function due to a medical or physical disease
Defined in: The Cohort Ontology
An organization belonging to the ENIGMA consortium. Organization can be hospitals, universities, departments, etc.
Defined in: The Organization Ontology
Describes if age of onset of subject's other psychiatric disorders is specified.
Defined in: The Psychopathology Ontology
Describes the subject's other psychiatric diagnoses at the time of scan (e.g. borderline personality disorder, ADHD, etc.).
Defined in: The Psychopathology Ontology
Describes the subject's other psychiatric diagnoses during their lifetime (e.g. borderline personality disorder, ADHD, etc.)
Defined in: The Psychopathology Ontology
Type of other medication used at time of scanning. Please provide the medication names.
Defined in: The Medication Ontology
Type of other medication used during lifetime. Please provide the medication names.
Defined in: The Medication Ontology
Describes whether age of onset of subject's substance use disorder is specified.
Defined in: The Disorder Ontology
Describes subject's current drug use that meets criteria for substance abuse disorder at the time of scan (e.g. cocaine, opiods etc.)
Defined in: The Disorder Ontology
Describes subject's previous lifetime drug use that meets criteria for lifetime substance abuse disorder (e.g. cocaine, opiods etc.)
Defined in: The Disorder Ontology
Describes whether age of onset of subject's Panic Disorder is specified.
Defined in: The Psychopathology Ontology
Describes if the subject currently has Panic Disorder.
Defined in: The Psychopathology Ontology
Describes if the subject had Panic Disorder during their lifetime.
Defined in: The Psychopathology Ontology
Highest level of parental socioeconomic status either based on education, occupation or both.
Defined in: The Demographic Ontology
The scale used in measuring a parent(s) socioeconomic status.
Defined in: The Demographic Ontology
Individual involved with the cohort
Defined in: The Cohort Ontology
Project associated with the cohort
Defined in: The Cohort Ontology
An image processing or genetic analysis protocol used to extract brain feature data
Defined in: The Project Ontology
A class used to describe psychopathology covariate information for a cohort or study.
Defined in: The Psychopathology Ontology
Describes whether the age of onset of the subject's psychotic disorder is specified.
Defined in: The Psychopathology Ontology
Describes if the subject currently has a Psychotic Disorder.
Defined in: The Psychopathology Ontology
Describes whether the subject's Psychotic Disorder type (ie: schizophrenia, schizoaffective disorder, delusional disorder, psychosis NOS, schizophreniform disorder, brief psychotic disorder, shared psychotic disorder, substance-induced psychosis) is specified.
Defined in: The Psychopathology Ontology
Describes if the subject had the Psychotic Disorder during their lifetime.
Defined in: The Psychopathology Ontology
Describes if the age of onset of the subject's Post-Traumatic Stress Disorder is specified.
Defined in: The Psychopathology Ontology
Describes if the subject currently has Post-Traumatic Stress Disorder.
Defined in: The Psychopathology Ontology
Describes if the subject had Post-Traumatic Stress Disorder during their lifetime.
Defined in: The Psychopathology Ontology
Subject's race/ethnicity.
Defined in: The Demographic Ontology
Defined in: The Project Ontology
Describes which data type is required by a project
Defined in: The Project Ontology
Disorders which affect the respiratory system
Defined in: The Cohort Ontology
A class used to describe Questionnaire Score covariates information for a cohort or study.
Defined in: The Scores Ontology
Property to state whether subject's sex (male, female, other) is specified or not.
Defined in: The Demographic Ontology
Blanket term ecompassing serious medical condtions
Defined in: The Cohort Ontology
Describes if the subject is currently smoking.
Defined in: The Disorder Ontology
Describes if the subject smoked during their lifetime.
Defined in: The Disorder Ontology
Describes whether age of onset of subject's Social Anxiety Disorder is specified.
Defined in: The Psychopathology Ontology
Describes if the subject currently has Social Anxiety Disorder.
Defined in: The Psychopathology Ontology
Describes if the subject had Social Anxiety Disorder during their lifetime.
Defined in: The Psychopathology Ontology
Describes whether the subject's Social and Occupational Functioning Assessment Scale total score is specified.
Defined in: The Scores Ontology
Presence of a somatic illness
Defined in: The Medication Ontology
Specific somatic illness measured/found in subjects
Defined in: The Medication Ontology
Property that indicates which project/working group studies which disorder
Defined in: The Cohort Ontology
The scale used in measuring a subject’s socioeconomic status.
Defined in: The Demographic Ontology
The highest level of subject's socioeconomic status based on education, occupation or both.
Defined in: The Demographic Ontology
Property which states whether the identification code/number of unique subjects is specified.
Defined in: The Demographic Ontology
A mental health disorder defined by the overusage or abuse of a substance
Defined in: The Cohort Ontology
A subset of substance abuse in which symptoms of withdrawal may appeared after reduction of substance use
Defined in: The Cohort Ontology
Use of 1st generation (typical) antipsychotics at time of scanning
Defined in: The Medication Ontology
Use of 1st generation (typical) antipsychotics during lifetime
Defined in: The Medication Ontology
Encoding format of an item
Defined in: The Cohort Ontology
Describes which protocol was used in a project
Defined in: The Project Ontology
Describes the scanner used by the cohort
Defined in: The Cohort Ontology
Disorder which affects the body's network of blood vessels
Defined in: The Cohort Ontology
Group of researchers studying a certain topic/disease
Defined in: The Cohort Ontology