Publications

• Ten Simple Rules for the Care and Feeding of Scientific Data, Alyssa Goodman, Alberto Pepe, Alexander W. Blocker, Christine L. Borgman, Kyle Cranmer, Merce Crosas, Rosanne Di Stefano, Yolanda Gil, Paul Groth, Margaret Hedstrom, David W. Hogg, Vinay Kashyap, Ashish Mahabal, Aneta Siemiginowska, Aleksandra Slavkovic. To appear in PLOS Computational Biology, 2014
  


• "Human Tutorial Instruction in the Raw", Yolanda Gil. In ACM Transactions on Interactive Intelligent Systems, 2014
  


• Similarity Assessment and Efficient Retrieval of Semantic Workflows, Ralph Bergmann, Yolanda Gil. In Information Systems Journal, Vol. 40, 2014
  


• A Primer for the PROV Provenance Model, Yolanda Gil, Simon Miles, Khalid Belhajjame, Henela Deus, Daniel Garijo, Graham Klyne, Paolo Missier, Stian Soiland-Reyes, Stephan Zednik. In World Wide Web Consortium (W3C), 2014
  


• "Quantifying Reproducibility in Computational Biology: The Case of the Tuberculosis Drugome", Daniel Garijo, Sarah Kinnings, Li Xie, Lei Xie, Yinliang Zhang, Philip E. Bourne, Yolanda Gil. In PLOS ONE, 2013
  


• "Common Motifs in Scientific Workflows: An Empirical Analysis", Daniel Garijo, Pinar Alper, Khalid Belhajjame, Oscar Corcho, Yolanda Gil, Carole Goble. In Future Generation Computer Systems, 2013
  


• "Structured Analysis of the ISI Atomic Pair Actions Dataset Using Workflows", Ricky J. Sethi, Hyunjoon Jo, Yolanda Gil. In Pattern Recognition Letters 34(15), 2013
  


• The Democratization of Semantic Properties: An Analysis of Semantic Wikis, Yolanda Gil, Angela Knight, Kevin Zhang, Larry Zhang, Varun Ratnakar, Ricky Sethi. In Seventh IEEE International Conference on Semantic Computing (ICSC), 2013
  


• Knowledge Capture in the Wild: A Perspective from Semantic Wiki Communities, Yolanda Gil, Varun Ratnakar. In Seventh ACM International Conference on Knowledge Capture (K-CAP), 2013
  


• Detecting Common Scientific Workflow Fragments Using Templates and Execution Provenance, Daniel Garijo, Oscar Corcho, Yolanda Gil. In Seventh ACM International Conference on Knowledge Capture (K-CAP), 2013
  


• Social Knowledge Collection, Yolanda Gil. In Handbook of Human Computation, 2013
  


• Using Semantic Workflows to Disseminate Best Practices and Accelerate Discoveries in Multi-Omic Data Analysis, Yolanda Gil, Shannon McWeeney, Christopher E. Mason. In AAAI Workshop on Expanding the Boundaries of Health Informatics using AI (HIAI), held in conjunction with the Conference of the Association for the Advancement of Artificial Intelligence (AAAI), 2013
  


• Intelligent Assistance to Disseminate Best Practices and Accelerate Discoveries in Cancer Omics, Yolanda Gil, Christopher E. Mason, Christina Zheng, Shannon McWeeney. In 2013 NCI EDRN Cancer Biomarkers Bioinformatics Workshop, Pasadena, CA, 2013
  


• Towards Task-Centered Network Models through Semantic Workflows, Yolanda Gil. In Proceedings of the IEEE Conference on Intelligence and Security Informatics (ISI), 2013
  


• An Initial Analysis of Semantic Wikis, Yolanda Gil, Angela Knight, Kevin Zhang, Larry Zhang, Ricky Sethi. In Proceedings of the ACM International Conference on Intelligent User Interfaces (IUI), 2013
  


• The AAAI Fall Symposium on "Discovery Informatics: The Role of AI Research in Innovating Scientific Processes, Yolanda Gil, Haym Hirsh. In AI Magazine 34(1), 2013
  


• PROV-DM: The PROV Data Model, Luc Moreau, Paolo Missier, Khalid Belhajjame, Reza B'Far, James Cheney, Sam Coppens, Stephen Cresswell, Yolanda Gil, Paul Groth, Graham Klyne, Timothy Lebo, Jim McCusker, Simon Miles, James Myers, Satya Sahoo, Curt Tilmes. In World Wide Web (W3C), 2013
  


• Time-Bound Analytic Tasks on Large Datasets through Dynamic Configuration of Workflows, Yolanda Gil, Varun Ratnakar, Rishi Verma, Andrew Hart, Paul Ramirez, Arni Sumarlidason, Sam Park. In Proceedings of the Eighth Workshop on Workflows in Support of Large-Scale Science (WORKS), held in conjunction with ACM Supercomputing 2013, Denver, Colorado, November 2013
  


• Capturing Data Analytics and Visualization Expertise with Workflows, David Kale, Samuel Di, Yan Liu, Yolanda Gil. In AAAI Fall Symposium in Discovery Informatics, November 2013
  


• Large-Scale Multimedia Content Analysis Using Scientific Workflows, Hyunjoon Jo, Ricky Sethi, Andrew Philpot, Yolanda Gil. In ACM International Conference on Multimedia, October 2013
  


• Mapping Semantic Workflows to Alternative Workflow Execution, Yolanda Gil. In IEEE International Conference on Semantic Computing (ICSC), September 2013
  


• Requirements for Provenance on the Web, Paul Groth, Yolanda Gil, James Cheney, Simon Miles. In International Journal of Digital Curation, 7(1), 2012
  


• Capturing Common Knowledge about Tasks: Intelligent Assistance for To Do Lists, Yolanda Gil, Varun Ratnakar, Timothy Chklovski, Paul Groth, Denny Vrandecic. In ACM Transactions on Interactive Intelligent Systems, 2012
  


• Augmenting PROV with Plans in P-PLAN: Scientific Processes as Linked Data, Daniel Garijo, Yolanda Gil. In Second International Workshop on Linked Science: Tackling Big Data (LISC), held in conjunction with the International Semantic Web Conference (ISWC), 2012
  


• Discovery Informatics: AI Opportunities in Scientific Discovery, Yolanda Gil, Haym Hirsh. In AAAI Fall Symposium on Discovery Informatics: The Role of AI Research in Innovating Scientific Processes, 2012
  


• Organic Data Sharing: A Novel Approach to Scientific Data Sharing, Yolanda Gil, Varun Ratnakar, Paul Hanson. In Second International Workshop on Linked Science: Tackling Big Data (LISC), held in conjunction with the International Semantic Web Conference (ISWC), 2012
  


• Automatic Metadata Annotation through Reconstructing Provenance, Paul Groth, Yolanda Gil, Sara Magliacane. In Proceedings of the Third International Workshop on the role of Semantic Web in Provenance Management (SWPM), 2012
  


• Common Motifs in Scientific Workflows: An Empirical Analysis, Daniel Garijo, Pinar Alper, Khalid Belhajjame, Oscar Corcho, Yolanda Gil, Carole Goble. In Proceedings of the IEEE Conference on e-Science, Chicago, 2012
  


• "Scientific Workflows: The Key to Convergence?", Mike P. McCann, Andreas F. Hofmann, Thomas C. Harmon, Yolanda Gil. In Ocean Sciences Meeting, Salt Lake City, Utah, 2012
  


• "Designing a Roadmap for Workflow Cyberinfrastructure in the Geosciences: From Big Data to the Long Tail", Yolanda Gil, Ewa Deelman, Ibrahim Demir, Chris Duffy, Marlon Pierce, Suresh Marru, Gerry Wiener. In American Geophysical Union Fall Meeting, San Francisco, CA, 2012
  


• "Using Semantic Workflows for Genome-Scale Analysis", Yolanda Gil, Varun Ratnakar, Ewa Deelman, Christopher Mason. In International Conference on Intelligent Systems for Molecular Biology (ISMB), Long Beach, CA, 2012
  


• Designing a Roadmap for Geoscience Workflows, Christopher Duffy, Yolanda Gil, Ewa Deelman, Suresh Marru, Marlon Pierce, Ibrahim Demir, Gerry Wiener. In Eos Transactions of the American Geophysical Union 93(24), 2012
  


• EarthCube Report on a Workflows Roadmap for the Geosciences, Ewa Deelman, Chris Duffy, Yolanda Gil, Suresh Marru, Marlon Pierce, Gerry Wiener. In National Science Foundation, Arlington, VA., 2012
  


• Final Report of the 2012 NSF Workshop on Discovery Informatics, Yolanda Gil, Haym Hirsh. In National Science Foundation, Arlington, VA., 2012
  


• Reusing Workflow Fragments Across Multiple Data Domains, Ricky J. Sethi, Hyunjoon Jo, Yolanda Gil. In Proceedings of the Seventh Workshop on Workflows in Support of Large-Scale Science (WORKS'12), held in conjunction with SC 2012, 2012
  


• A New Approach for Publishing Workflows: Abstractions, Standards, and Linked Data, Daniel Garijo, Yolanda Gil. In Proceedings of the Sixth Workshop on Workflows in Support of Large-Scale Science (WORKS'11), held in conjunction with SC 2011, Seattle, Washington, 2011
  


• A Framework for Efficient Text Analytics through Automatic Configuration and Customization of Scientific Workflows, Matheus Hauder, Yolanda Gil, Yan Liu. In Proceedings of the Seventh IEEE International Conference on e-Science, Stockholm, Sweden, 2011
  


• Making Data Analysis Expertise Broadly Accessible through Workflows, Matheus Hauder, Yolanda Gil, Ricky Sethi, Yan Liu, Hyunjoon Jo. In Proceedings of the Sixth Workshop on Workflows in Support of Large-Scale Science (WORKS'11), held in conjunction with SC 2011, Seattle, Washington, 2011
  


• Linked Data for Network Science, Paul Groth, Yolanda Gil. In First International Workshop on Linked Science at the International Semantic Web Conference (ISWC), Bonn, Germany, 2011
  


• Interactive Knowledge Capture in the New Millenium: How the Semantic Web Changed Everything, Yolanda Gil. In The Knowledge Engineering Review, 2011
  


• "Goal-Directed Meta-Control for Integrated Procedure Learning.", Jihie Kim, Karen Myers, Melinda Gervasio, Yolanda Gil. In Metareasoning: Thinking about Thinking, Cox, M.T. and Raja, A. (Eds), MIT Press, 2011
  


• The Open Provenance Model Core Specification (v1.1), Luc Moreau, Ben Clifford, Juliana Freire, Joe Futrelle, Yolanda Gil, Paul Groth, Natalia Kwasnikowska, Simon Miles, Paolo Missier, Jim Myers, Beth Plale, Yogesh Simmhan, Eric Stephan, Jan Van denBussche. In Future Generation Computer Systems, 2011
  


• A Formal Framework for Combining Natural Instruction and Demonstration for End-User Programming., Christian Fritz, Yolanda Gil. In Proceedings of the ACM International Conference on Intelligent User Interfaces, Palo Alto, CA. 2011
  


• Final Report of the W3C Provenance Incubator Group, Yolanda Gil, James Cheney, Paul Groth, Olaf Hartig, Simon Miles, Luc Moreau, Paolo Pinheiro daSilva. In World Wide Web Consortium (W3C), 2011
  


• Want World Domination? Win at Risk! -- Matching To-Do Items with How-Tos from the Web, Denny Vrandecic, Yolanda Gil, Varun Ratnakar. In Proceedings of the ACM International Conference on Intelligent User Interfaces, Palo Alto, CA. 2011
  


• TellMe: Learning Procedures from Tutorial Instruction, Yolanda Gil, Varun Ratnakar, Christian Fritz. In Proceedings of the ACM International Conference on Intelligent User Interfaces, Palo Alto, CA. 2011
  


• A Semantic Framework for Automatic Generation of Computational Workflows Using Distributed Data and Component Catalogs, Yolanda Gil, Pedro Antonio Gonzalez-Calero, Jihie Kim, Joshua Moody, Varun Ratnakar. In Journal of Experimental and Theoretical Artificial Intelligence, 2010
  


• Shortipedia: Aggregating and Curating Semantic Web Data, Denny Vrandecic, Varun Ratnakar, Markus Krotzsch. In Semantic Web Challenge at the International Semantic Web Conference (ISWC), Shanghai, China, 2010
  


• Social Task Networks: Personal and Collaborative Task Formulation and Management in Social Networking Sites., Yolanda Gil, Paul Groth, Varun Ratnakar. In AAAI Fall Symposium Series on Proactive Assistant Agents, Arlington, VA, November 2010
  


• Towards the Integration of Programming by Demonstration and Programming by Instruction using Golog., Christian Fritz, Yolanda Gil. In AAAI Workshop on Plan, Activity, and Intent Recognition (PAIR), Atlanta, GA, July 2010
  


• Assisting Scientists with Complex Data Analysis Tasks through Semantic Workflows., Yolanda Gil, Varun Ratnakar, Christian Fritz. In AAAI Fall Symposium Series on Proactive Assistant Agents, Arlington, VA, November 2010
  


• Parameterized Specification, Configuration, and Execution of Data-Intensive Scientific Workflows., Vijay Kumar, Tahsin Kurc, Varun Ratnakar, Jihie Kim, Gaurang Mehta, Karan Vahi, Yoonju Lee Nelson, P. Sadayappan, Ewa Deelman, Yolanda Gil, Mary Hall, Joel Saltz. In Cluster Computing Journal, Vol 13, 2010
  


• "High Performance Computing and Grid Computing for Integrative Biomedical Research", Tahsin Kurc, Shannon Hastings, Vijay Kumar, Stephen Langella, Ashish Sharma, Tony Pan, Scott Oster, David Ervin, Justin Permar, Sivaramakrishnan Narayanan, Yolanda Gil, Ewa Deelman, Mary Hall, Joel Saltz. In Journal of High Performance Computing Applications, 2010
  


• "Reasoning about the Appropriate Use of Private Data through Computational Workflows", Yolanda Gil, Christian Fritz. In AAAI Spring Symposium on Privacy Management, Stanford, CA, March 23-25, 2010
  


• "Parameterized Specification, Configuration, and Execution of Data-Intensive Scientific Workflows, Vijay S. Kumar, Tahsin Kurc, Varun Ratnakar, Jihie Kim, Gaurang Mehta, Karan Vahi, Yoonju Lee Nelson, P Sadayappan, Ewa Deelman, Yolanda Gil, Mary Hall, Joel Saltz. In Cluster Computing Journal, 2010
  


• "Expressive Reusable Workflow Templates", Yolanda Gil, Paul Groth, Varun Ratnakar, Christian Fritz. In Proceedings of the Fifth IEEE International Conference on e-Science, 2009
  


• "Workflow Matching Using Semantic Metadata", Yolanda Gil, Jihie Kim, Yolanda Gil, Gonzalo Florez, Varun Ratnakar, Pedro A. Gonzalez Calero. In Proceedings of the Fifth International Conference on Knowledge Capture (K-CAP), 2009
  


• ""From Data to Knowledge to Discoveries: Scientific Workflows and Artificial Intelligence"", Yolanda Gil. In Scientific Programming, Volume 17, Number 3, 2009.
  


• ""Principles for Interactive Acquisition and Validation of Workflows"", Yolanda Gil, Jihie Kim, Marc Spraragen. In The Journal of Experimental and Theoretical Artificial Intelligence, 2010
  


• Analyzing the Gap Between Workflows and their Natural Language Descriptions, Paul Groth, Yolanda Gil. In Proceedings of the IEEE Third International Workshop on Scientific Workflows (SWF), Los Angeles, CA, July 10, 2009
  


• Scaffolding Instructions to Learn Procedures from Users, Paul Groth, Yolanda Gil. In AAAI Spring Symposium on Agents that Learn from Human Teachers, Stanford, CA, March 23-25, 2009
  


• "A Scientific Workflow Construction Command Line", Paul Groth, Yolanda Gil. In 2009 ACM International Conference on Intelligent User Interfaces (IUI), Sanibel, FL, February 8-11, 2009
  


• "Leveraging Social Networking Sites to Acquire Rich Task Structure", Yolanda Gil, Paul Groth, Varun Ratnakar. In Proceedings of the IJCAI 2009 Workshop on User-Contributed Knowledge and Artificial Intelligence: An Evolving Synergy (WikiAI09), held in conjunction with the Twenty-First International Joint Conference on Artificial Intelligence (IJCAI-09), Pasadena, CA, July 13, 2009
  


• Automating To-Do Lists for Users: Interpretation of To-Dos for Selecting and Tasking Agents, Yolanda Gil, Varun Ratnakar. In Proceedings of the Twenty-Third Conference of the Association for the Advancement of Artificial Intelligence (AAAI-08), Chicago, IL, July 13-17, 2008
  


• Towards Intelligent Assistance for To-Do Lists, Yolanda Gil, Varun Ratnakar. In Proceedings of the 2008 International Conference on Intelligent User Interfaces (IUI-2008), Canary Islands, Spain, January 2008
  


• Enhancing Interaction with To-Do Lists Using Artificial Assistants, Yolanda Gil, Timothy Chklovski. In AAAI Spring Symposium on Interaction Challenges for Artificial Assistants, Stanford, CA, March 26-28 2007
  


• ""Principles for Interactive Acquisition and Validation of Workflows"", Jihie Kim, Yolanda Gil, Marc Spraragen. In Journal of Experimental and Theoretical Artificial Intelligence
  


• Determining the Trustworthiness of New Electronic Contracts, Paul Groth, Simon Miles, Sanjay Modgil, Nir Oren, Michael Luck, Yolanda Gil. In Proceedings of the Tenth Annual Workshop on Engineering Societies in the Agents' World, (ESAW-09), Utrecht, The Netherlands, November 18-20, 2009
  


• Towards Content Trust of Web Resources, Yolanda Gil, Donovan Artz. In Journal of Web Semantics, 5(4), 2007
  


• A Survey of Trust in Computer Science and the Semantic Web, Donovan Artz, Yolanda Gil. In Journal of Web Semantics, Volume 5, Issue 2, 2007
  


• Privacy Enforcement in Data Analysis Workflows, Yolanda Gil, William K. Cheung, Varun Ratnakar, Kai-kin Chan. In 2007 Workshop on Privacy Enforcement and Accountability with Semantics (PEAS'07), held in conjunction with the Sixth International Semantic Web Conference (ISWC'07) and the Second Asian Semantic Web Conference (ASWC'07), Busan, Korea, November 11-15, 2007
  


• Towards Privacy Aware Data Analysis Workflows for e-Science, William Cheung, Yolanda Gil. In 2007 Workshop on Semantic e-Science (SeS2007), held in conjunction with the Twenty-Second Conference of the Association for the Advancement of Artificial Intelligence (AAAI), Vancouver, British Columbia, Canada, July 22-26, 2007
  


• "Developing a Meta-Level Problem Solver for Integrated Learners", Jihie Kim, Yolanda Gil. In AAAI Workshop on Metareasoning: Thinking about thinking, 2008
  


• ""Incorporating tutoring principles into interactive knowledge acquisition"", Jihie Kim, Yolanda Gil, Marc Spraragen. In International Journal of Human-Computer Studies Volume 65, Issue 10, October 2007, Pages 852-872
  


• "Provenance Trails in the Wings/Pegasus Workflow System", Jihie Kim, Ewa Deelman, Yolanda Gil, Gaurang Mehta, Varun Ratnakar. In Concurrency and Computation: Practice and Experience, Special Issue on the First Provenance Challenge, Vol 20, Issue 5, April 2008
  


• ""Scientific Software as Workflows: From Discovery to Distribution"", David Woollard, Nenad Medvidovic, Yolanda Gil, Chris Mattmann. In IEEE Software, Special Issue on Developing Scientific Software, July/August 2008
  


• ""Designing and Parameterizing a Workflow for Optimization: A Case Study in Biomedical Imaging."", Vijay Kumar, Mary Hall, Jihie Kim, Yolanda Gil, Tahsin Kurc, Ewa Deelman, Joel Saltz. In Proceedings of NSF Workshop on Next Generation Software, held in conjunction with the IEEE International Symposium on Parallel and Distributed Processing (IPDPS-08), Miami, FL, April 2008
  


• ""Self-Configuring Applications for Heterogeneous Systems: Program Composition and Optimization Using Cognitive Techniques"", Mary Hall, Yolanda Gil, Robert Lucas. In Proceedings of the IEEE, Special Issue on Cutting-Edge Computing: Using New Commodity Architectures, Volume 96, Issue 5, May 2008
  


• ""Examining the Challenges of Scientific Workflows"", Yolanda Gil, Ewa Deelman, Mark Ellisman, Thomas Fahringer, Geoffrey Fox, Dennis Gannon, Carole Goble, Miron Livny, Luc Moreau, Jim Myers. In IEEE Computer, vol. 40, no. 12, pp. 24-32, December, 2007
  


• "Wings for Pegasus: Creating Large-Scale Scientific Applications Using Semantic Representations of Computational Workflows", Yolanda Gil, Varun Ratnakar, Ewa Deelman, Gaurang Mehta, Jihie Kim. In Proceedings of the 19th Annual Conference on Innovative Applications of Artificial Intelligence (IAAI), Vancouver, British Columbia, Canada, July 22-26, 2007
  


• "Workflow Composition", Yolanda Gil. In In Workflows for e-Science, D. Gannon, E. Deelman, M. Shields, I. Taylor (Eds), Springer Verlag, 2006
  


• "Managing Large-Scale Scientific Workflows in Distributed Environments: Experiences and Challenges", Ewa Deelman, Yolanda Gil. In Proceedings of the Workshop on Scientific Workflows and Business Workflow Standards in e-Science, The Second IEEE International Conference on e-Science and Grid Computing, Amsterdam, The Netherlands, December 4-6, 2006
  


• "Wings for Pegasus: A Semantic Approach to Creating Very Large Scientific Workflows", Yolanda Gil, Varun Ratnakar, Ewa Deelman, Marc Spraragen, Jihie Kim. In Proceedings of the OWL: Experiences and Directions 2006 (OWLED-06), Athens, GA, November 10-11, 2006
  


• "Semantic Metadata Generation for Large Scientific Workflows", Jihie Kim, Yolanda Gil, Varun Ratnakar. In Proceedings of the Fifth International Semantic Web Conference (ISWC-06), Athens, GA, November 5-9, 2006
  


• "On Agents and Grids: Creating the Fabric of a New Generation of Distributed Intelligent Systems", Yolanda Gil. In Journal of Web Semantics, Volume 4, Issue 2, June 2006
  


• "Workflow Composition", Yolanda Gil. In "Workflows for e-Science", D. Gannon, E. Deelman, M. Shields, I.Taylor (Eds)
  


• "Semantic Metadata Generation for Large Scientific Workflows", Jihie Kim, Yolanda Gil, Varun Ratnakar. In International Semantic Web Conference, ISWC-2006, Athens, Georgia, USA
  


• "Wings for Pegasus: A Semantic Approach to Creating Very Large Scientific Workflows", Yolanda Gil, Varun Ratnakar, Ewa Deelman, Marc Sparagen, Jihie Kim. In OWL: Experiences and Directions 2006, OWL-2006, Athens, Georgia, USA
  


• On agents and grids: Creating the fabric for a new generation of distributed intelligent systems, Yolanda Gil. In Journal of Web Semantics, Volume 4, Issue 2, June 2006.
  


• Metadata Catalogs with Semantic Representations., Yolanda Gil, Varun Ratnakar, Ewa Deelman. In IPAW'06 International Provenance and Annotation Workshop, Chicago, IL, May 3-5, 2006
  


• "Improving the Design of Intelligent Acquisition Interfaces for Collecting World Knowledge from Web Contributors", Timothy Chklovski, Yolanda Gil. In Proceedings of the Third International Conference on Knowledge Capture (K-CAP 2005). October 2-5, 2005, Banff, Canada
  


• "Collecting Paraphrase Corpora from Volunteer Contributors", Timothy Chklovski. In Proceedings of the Third International Conference on Knowledge Capture (K-CAP 2005). October 2-5, 2005, Banff, Canada
  


• " Global Path-based Refinement of Noisy Graphs Applied to Verb Semantics", Timothy Chklovski, Patrick Pantel. In Proceedings of the Proceedings of Joint Conference on Natural Language Processing (IJCNLP-05), 2005, Jeju Island, South Korea
  


• "An Analysis of Procedure Learning by Instruction", Jim Blythe. In Proceedings of the Twentieth National Conference on Artificial Intelligence (AAAI-05), 2005, Pittsburgh, Pennsylvania
  


• "An Analysis of Knowledge Collected from Volunteer Contributors", Timothy Chklovski, Yolanda Gil. In Proceedings of the Twentieth National Conference on Artificial Intelligence (AAAI-05), 2005, Pittsburgh, Pennsylvania
  


• "Towards Managing Knowledge Collection from Volunteer Contributors", Timothy Chklovski. In Proceedings of AAAI Spring Symposium on Knowledge Collection from Volunteer Contributors (KCVC05). 2005, Stanford, CA
  


• "1001 Paraphrases: Incenting Responsible Contributions in Collecting Paraphrases from Volunteers", Timothy Chklovski. In Proceedings of AAAI Spring Symposium on Knowledge Collection from Volunteer Contributors (KCVC05). 2005, Stanford, CA
  


• "Task Learning by Instruction in Tailor", Jim Blythe. In Proceedings of Conference on Intelligent User Interfaces (IUI05). 2005, San Diego
  


• "User Interfaces with Semi-Formal Representations: a Study of Designing Argumentation Structures", Timothy Chklovski, Varun Ratnakar, Yolanda Gil. In Proceedings of Conference on Intelligent User Interfaces (IUI05). 2005, San Diego
  


• "Designing Interfaces for Guided Collection of Knowledge about Everyday Objects from Volunteers", Timothy Chklovski. In Proceedings of Conference on Intelligent User Interfaces (IUI05). 2005, San Diego
  


• " VerbOcean: Mining the Web for Fine-Grained Semantic Verb Relations", Timothy Chklovski, Patrick Pantel. In Proceedings of Conference on Empirical Methods in Natural Language Processing (EMNLP-04). 2004, Barcelona, Spain
  


• "Artemis: Integrating Scientific Data on the Grid", Rattapoom Tuchinda, Snehal Thakkar, Yolanda Gil, Ewa Deelman. In Proceedings of the 16th Annual Conference on Innovative Applications of Artificial Intelligence (IAAI), July 25-29, San Jose, CA, 2004
  


• "Incremental Formalization of Document Annotations through Ontology-based Paraphrasing", Jim Blythe, Yolanda Gil. In Proceedings of the International World Wide Web Conference (WWW-2004), 17-22 May, 2004, New York, NY, USA
  


• "Artificial Intelligence and Grids: Workflow Planning and Beyond", Yolanda Gil, Ewa Deelman, Jim Blythe, Carl Kesselman, Hongsuda Tangmunarunkit. In IEEE Intelligent Systems, special issue on e-science, Jan/Feb 2004
  


• "An Intelligent Assistant for Interactive Workflow Composition ", Jihie Kim, Marc Spraragen, Yolanda Gil. In Proceedings of the International Conference on Intelligent User Interfaces (IUI-2004); Madeira, Portugal, 2004
  


• "Memory-Based Meta-Level Reasoning for Interactive Knowledge Capture", Jihie Kim. In Proceedings of AAAI Spring Symposium on Metacognition in Computation, 2005
  


• "From Reflection to Interaction: Use of Memory in Interactive Knowledge Acquisition", Jihie Kim. In Proceedings of CogSci-2005
  


• "A Knowledge-Based Approach to Interactive Workflow Composition", Jihie Kim, Yolanda Gil, Marc Spraragen. In Workshop: Planning and Scheduling for Web and Grid Services, at the 14th International Conference on Automatic Planning and Scheduling (ICAPS 04); Whistler, Canada, 2004.
  


• "Planning and Metadata on the Computational Grid", Jim Blythe, Ewa Deelman, Yolanda Gil. In AAAI Spring Symposium on Semantic Web Services, Palo Alto, California, USA, 2004
  


• "Towards Interactive Composition of Semantic Web Services", Jihie Kim, Yolanda Gil. In AAAI Spring Symposium on Semantic Web Services, Palo Alto, California, USA, 2004
  


• "Mixed-Initiative Workflow Composition", Marc Spraragen. In Proceedings of American Association of Artificial Intelligence (AAAI-04) (Student Abstract), San Jose, California, USA, 2004
  


• "LEARNER: A System for Acquiring Commonsense Knowledge by Analogy", Timothy Chklovski. In Proceedings of Second International Conference on Knowledge Capture (K-CAP 2003). October 2003
  


• "TRELLIS: Supporting Decision Making via Argumentation in the Semantic Web", Timothy Chklovski, Yolanda Gil, Varun Ratnakar, John Lee. In Proceedings of 2nd International Semantic Web Conference (ISWC 2003), Web. (Short paper). 20-23 October 2003, Sanibel Island, Florida, USA
  


• "Towards Interactive Composition of Semantic Web Services (Two Page Poster)", Jihie Kim, Yolanda Gil. In 2nd International Semantic Web Conference (ISWC 2003), Sanibel Island, Florida, USA, 2003
  


• "Workflow Management in GriPhyN", Ewa Deelman, Jim Blythe, Yolanda Gil, Carl Kesselman. In Grid Resource Management, J. Nabrzyski, J. Schopf, and J. Weglarz editors, Kluwer, 2003
  


• "Proactive Acquisition from Tutoring and Learning Principles", Jihie Kim, Yolanda Gil. In Proceedings of the AI in Education (AIEd-2003), Sydney, Australia, 2003
  


• "The Role of Planning in Grid Computing", Jim Blythe, Ewa Deelman, Yolanda Gil, Carl Kesselman, Amit Agarwal, Gaurang Mehta, Karan Vahi. In Proceedings of the 13th International Conference on Automated Planning and Scheduling (ICAPS) June 9-13, 2003, Trento, Italy
  


• "Mapping Abstract Complex Workflows onto Grid Environments", Ewa Deelman, Jim Blythe, Yolanda Gil, Carl Kesselman, Gaurang Mehta, Karan Vahi, Albert Lazzarini, Adam Arbree, Richard Cavanaugh, Scott Koranda. In Journal of Grid Computing, Vol. 1, No. 1, 2003
  


• "Transparent Grid Computing: A Knowledge-Based Approach", Jim Blythe, Ewa Deelman, Yolanda Gil, Carl Kesselman. In Proceedings of the 15th Conference on Innovative Applications of Artificial Intelligence (IAAI), August 12-15, 2003, Acapulco, Mexico
  


• "Supporting Plan Authoring and Analysis", Jihie Kim, Jim Blythe. In Proceedings of the Seventh International Conference on Intelligent User Interfaces (IUI-2003)
  


• "Deriving Acquisition Principles from Tutoring Principles", Jihie Kim, Yolanda Gil. In Proceedings of the Intelligent Tutoring Systems Conference (ITS), Biarritz, France, June 2002
  


• "Visual Exploration and Incremental Utility Elicitation", Jim Blythe. In Proceedings of the Eighteenth National Conference on Artificial Intelligence (AAAI-02) 526-532
  


• TRELLIS: An Interactive Tool for Capturing Information Analysis and Decision Making, Yolanda Gil, Varun Ratnakar. In Proceedings of the 13th International Conference on Knowledge Engineering and Knowledge Management, Siguenza, Spain, October 1-4, 2002.
  


• IKRAFT: Interactive Knowledge Representation and Acquisition from Text, Yolanda Gil, Varun Ratnakar. In Proceedings of the 13th International Conference on Knowledge Engineering and Knowledge Management, Siguenza, Spain, October 1-4, 2002.
  


• "Interactive Knowledge Acqusition Tools: A Tutoring Perspective", Yolanda Gil, Jihie Kim. In Proceedings of the 24th Annual Meeting of the Cognitive Science Society (CogSci-2002), Fairfax, VA, August 8-10, 2002.
  


• Agent Technology to Support Human Organizations, Hans Chalupsky, Yolanda Gil, Craig Knoblock, Kristina Lerman, Jean Oh, David Pynadath, Tom Russ, Milind Tambe. In AI Magazine, Vol 23, No 2, Summer 2002.
  


• "Trusting Information Sources One Citizen at a Time", Yolanda Gil, Varun Ratnakar. In Proceedings of the First International Semantic Web Conference (ISWC), Sardinia, Italy, June 2002 : 162-176
  


• A Comparison of (Semantic) Markup Languages,, Varun Ratnakar, Yolanda Gil. In Proceedings of the 15th International FLAIRS Conference, Special Track on Semantic Web, Pensacola, FL, May 2002.
  


• "Electric Elves: Applying agent technology to support human organizations.", Hans Chalupsky, Yolanda Gil, Craig A. Knoblock, Kristina Lerman, Jean Oh, David V. Pynadath, Thomas A. Russ, Milind Tambe. In Proceedings of the Thirteenth Annual Conference on Innovative Applications of Artificial Intelligence (IAAI-2001) Seattle, WA, August 2001.
  


• ""User Studies of Knowledge Acquisition Tools: Methodology and Lessons Learned"", Jihie Kim, Marcelo Tallis. In Journal of Experimental and Theoretical Artificial Intelligence (JETAI), Vol 13, pp 359-378, 2001
  


• "An Integrated Environment for Knowledge Acquisition", Jim Blythe, Jihie Kim, Surya Ramachandran, Yolanda Gil. In Proceedings of the 2001 International Conference on Intelligent User Interfaces (IUI-2001), Santa Fe, New Mexico, January 2001. Recipient of the Best Paper Award
  


• "Knowledge Mobility: Semantics for the Web as a White Knight for Knowledge-Based Systems", Yolanda Gil. In "Spinning the Semantic Web", D.Fensel, J. Hendler, H. Lieberman, W. Whalster(Eds), MIT Press
  


• "Integrating Expectations from Different Sources to Help End Users Acquire Procedural Knowledge", Jim Blythe. In Proceedings of the Seventeenth International Joint Conference on Artificial Intelligence (IJCAI-01) 943-952
  


• "Knowledge Analysis on Process Models", Jihie Kim, Yolanda Gil. In Proceedings of the Seventeenth International Joint Conference on Artificial Intelligence (IJCAI-2001), Seattle, WA, August 2001
  


• "PHOSPHORUS: A Task-Based Agent Matchmaker", Surya Ramachandran, Yolanda Gil. In Proceedings of the Fifth International Conference on Autonomous Agents (Agents'01) (Short paper) Montreal, Canada, May 28-June 1, 2001
  


• "Acquiring Procedural Knowledge in Expect", Yolanda Gil, Jim Blythe, Surya Ramachandran, Jihie Kim. In AAAI 2000 fall symposium on Learning How to Do Things
  


• "How Can a Structured Representation of Capabilities Help in Planning?", Jim Blythe, Yolanda Gil. In AAAI 2000 workshop on Representational Issues for Real-world Planning Systems. Austin, TX, July 31, 2000.
  


• ""OntoMorph: A Translation System for Symbolic Knowledge"", Chalupsky H.. In Proceedings of the Seventh International Conference on Principles of Knowledge Representation and Reasoning (KR-2000), Breckenridge, CO, April 2000
  


• "A Problem-Solving Method for Plan Evaluation and Critiquing", Jim Blythe, Yolanda Gil
  


• "Acquiring Problem-Solving Knowledge from End Users: Putting Interdependency Models to the Test", Yolanda Gil, Jihie Kim. In Proceedings of Fifteenth National Conference on Artificial Intelligence (AAAI-2000), Austin, TX, July 30-August 3, 2000
  


• "PLANET: A Shareable and Reusable Ontology for Representing Plans", Yolanda Gil, Jim Blythe
  


• "User Studies of an Interdependency-Based Interface for Acquiring Problem-Solving Knowledge", Yolanda Gil, Jihie Kim. In Proceedings of the International Conference on Intelligent User Interfaces (IUI-2000), New Orleans, LA, January 9-12, 2000.
  


• "Representing Capabilities of Problem-Solving Methods", William Swartout, Yolanda Gil, Andre Valente. In Proceedings of 1999 IJCAI Workshop on Ontologies and Problem-Solving Methods
  


• "On the Role of Humans in Enterprise Control Systems: the Experience of INSPECT", Andre Valente, Jim Blythe, Yolanda Gil, William Swartout. In First DARPA-JFACC Symposium on Advances in Enterprise Control, San Diego, CA, November 1999.
  


• "Designing Scripts to Guide Users in Modifying Knowledge-Based Systems", Yolanda Gil, Marcelo Tallis. In Proceedings of the Fourteenth National Conference on Artificial Intelligence (AAAI-99), Orlando, FL, July 19-22, 1999.
  


• ""Knowledge Acquisition for Configuration Tasks: The Expect Approach"", Yolanda Gil, Surya Ramachandran. In Proceedings of Workshop on Configuration, AAAI-99
  


• "Deriving Expectations to Guide Knowledge Base Creation", Yolanda Gil, Jihie Kim. In Proceedings of the Fourteenth National Conference on Artificial Intelligence (AAAI-99), Orlando, FL, July 19-22, 1999.
  


• "Knowledge Acquisition using an English-Based Method Editor", Surya Ramachandran, Jim Blythe. In Proceedings of the Tenth Banff Knowledge Acquisition for Knowledge-Based Systems Workshop (KAW-99)
  


• ""User Studies of Knowledge Acquisition Tools: Methodology and Lessons Learned"", Jihie Kim, Marcelo Tallis. In Proceedings of the Tenth Banff Knowledge Acquisition for Knowledge-Based Systems Workshop (KAW-99), Banff, Alberta, Canada, April 1999
  


• "Decision-Theoretic Planning", Jim Blythe. In AI Magazine, Summer 1999
  


• "A Complete Bidirectional Planner", proceedings of the Fourth Conference on AI Planning Systems, 1998 ( Abstract and postscript), Jim Blythe, Eugene Fink. In Proceedings of the Fourth Conference on AI Planning Systems, 1998
  


• "A Script-Based Approach to Modifying Knowledge-Based Systems", Marcelo Tallis. In Proceedings of the Ninth Banff Knowledge Acquisition for Knowledge-Based Systems Workshop (KAW-98), Banff, Alberta, Canada, April 1998
  


• ""A Representation and Library for Force Support Objectives in Air Campaign Plans"", Andre Valente, Yolanda Gil, Jim Blythe. In USC/ISI Technical Report, 1998
  


• "A Script-Based Approach to Modifying Knowledge Bases", Marcelo Tallis, Yolanda Gil. In Proceedings of the Fourteenth National Conference on Artificial Intelligence (AAAI-97), Providence, RI, July 27-31, 1997
  


• "A Script-Based Approach to Modifying Knowledge-Based Systems", Marcelo Tallis. In Proceedings of the Fourteenth National Conference on Artificial Intelligence (AAAI-97), Providence, RI, July 27-31, 1997.
  


• "INSPECT: A Tool to Evaluate Air Campaign Plans", Andre Valente, Yolanda Gil, William Swartout. In Internal Project Report, 1997
  


• ""Analogical Replay for Efficient Conditional Planning"", Manuela Veloso, Jim Blythe. In Proceedings of AAAI-97
  


• ""Toward Distributed Use of Large-Scale Ontologies"", Bill Swartout, Ramesh Patil, Tom Russ, Kevin Knight. In Proceedings of the Tenth Knowledge Acquisition for Knowledge-Based Systems Workshop, November 9-14, 1996
  


• "Learning to Improve Uncertainty Handling in a Hybrid Planning System", Proceedings of the AAAI Fall Symposium on Learning Complex Behaviors in Intelligent Adaptive Systems, 1996 ( postscript file), Manuela Veloso, Jim Blythe
  


• "Explicit Representations of Problem-Solving Strategies to Support Knowledge Acquisition", Eric Melz, Yolanda Gil. In Proceedings of the Thirteenth National Conference on Artificial Intelligence (AAAI-96), Portland, OR, August 4-8, 1996
  


• "Expect: A User-Centered Environment for the Development and Adaptation of Knowledge-Based Planning Aids", Yolanda Gil, William Swartout. In Advanced Planning Technology: Technological Achievements of the ARPA/Rome Laboratory Planning Initiative, Austin Tate (Ed), AAAI Press, Menlo Park, CA, 1996.
  


• "Flexible Knowledge Acquisition Through Explicit Representation of Knowledge Roles", Yolanda Gil, William Swartout. In 1996 AAAI Spring Symposium on Acquisition, Learning, and Demonstration: Automating Tasks for Users, Stanford, CA, March 1996
  


• "Learning to Improve Uncertainty Handling in a Hybrid Planning System", Manuela Veloso, Jim Blythe. In Proceedings of the AAAI Fall Symposium on Learning Complex Behaviors in Intelligent Adaptive Systems, 1996
  


• "A Representation for Efficient Planning in Dynamic Domains with External Events", Jim Blythe. In Proceedings of the AAAI workshop on Theories of action, Planning and Control: Bridging the gap, 1996
  


• "Planning Experiments: Resolving Interactions between Two Planning Spaces", Yolanda Gil. In Proceedings of the Third International Conference on Artificial Intelligence Planning Systems (AIPS-96), May 29-31, 1996, Edinburgh, Scotland
  


• "Event-based decompositions for reasoning about external change in planners", Jim Blythe. In Proceedings of the Third International Conference on Artificial Intelligence Planning Systems (AIPS-96), May 29-31, 1996, Edinburgh, Scotland
  


• "INSPECT: an Intelligent System for Air Campaign Plan Evaluation based on Expect", Andre Valente, Yolanda Gil, William R. Swartout. In 1996
  


• "Transaction-Based Knowledge Acquisition: Complex Modifications Made Easier", Marcelo Tallis, Yolanda Gil. In Proceedings of the Ninth Knowledge Acquisition for Knowledge-Based Systems Workshop, February 26-March 3, 1995
  


• "Expect: Explicit Representations for Flexible Acquisition", Yolanda Gil, Bill Swartout. In Proceedings of the Ninth Knowledge Acquisition for Knowledge-Based Systems Workshop, February 26-March 3, 1995
  


• "The footprint principle for heuristics for probabilistic planners", Jim Blythe. In Proceedings of the European Workshop on Planning, 1995
  


• "Integrating Planning and Learning: The PRODIGY Architecture", Manuela Veloso, Jaime Carbonell, Alicia Perez, Daniel Borrajo, Jim Blythe, Eugene Fink. In Journal of Experimental and Theoretical AI, 7(1) 1995
  


• ""Planning and Learning in PRODIGY: Overview of an Integrated Architecture"", Jaime Carbonell, Oren Etzioni, Yolanda Gil, Robert Joseph, Craig Knoblock, Steven Minton, Manuela Veloso. In Goal-Driven Learning. Aswin Ram and David Leake (Eds), MIT Press, Boston, MA, 1995
  


• "Acquiring Criteria for Plan Quality Control", Brian Drabble, Yolanda Gil, Austin Tate. In AAAI Spring Symposium on "Planning Applications", Stanford, CA, March 1995
  


• "AI Planning in Dynamic, Uncertain Domains", Jim Blythe. In AAAI Spring Symposium on "Extending Theories of Action", Stanford, CA, March 1995
  


• "A Specification of Manufacturing Processes for Planning", Yolanda Gil. In Technical Report CMU-CS-91-179, School of Computer Science, Carnegie Mellon University, Pittsburgh PA 15213, 1995
  


• "Dimensions to Analyze Applications", Marc Linster, Yolanda Gil. In Proceedings of the Ninth Knowledge Acquisition for Knowledge-Based Systems Workshop, February 26-March 3, 1995
  


• "On Analyzing Planning Applications", Marc Linster, Yolanda Gil. In AAAI Fall Symposium on "Planning and Learning: On to Real Applications", New Orleans, LA, November 1994
  


• "Knowledge Refinement in a Reflective Architecture", Yolanda Gil. In Proceedings of the Twelfth National Conference of Artificial Intelligence (AAAI-94), Seattle, WA, August 1994
  


• "Towards Method-Independent Knowledge Acquisition", Cecile Paris, Yolanda Gil. In Knowledge Acquisition, Special issue on Machine Learning and Knowledge Acquisition, Volume 6 Number 2, June 1994
  


• "Developing Plan Evaluation and Critiquing Tools Based on Reuse and Capture of General Principles", Yolanda Gil, Jim Blythe
  


• "Domain-Specific Criteria to Direct and Evaluate Planning Systems", Yolanda Gil, Mark Hoffman, Austin Tate. In Proceedings of the 1994 Workshop of the Arpa/Rome Laboratories Planning Initiative, February 21-25, 1994, Tucson, AZ
  


• "Applying a General-Purpose Planning and Learning Architecture to Process Planning", Alicia Perez, Yolanda Gil. In AAAI Fall Symposium on "Planning and Learning: On to Real Applications", New Orleans, LA, November 1994
  


• "Planning with external events", Jim Blythe. In Proceedings of the Conference on Uncertainty in AI, 1994
  


• "Learning by Experimentation: Incremental Refinement of Incomplete Planning Domains", Yolanda Gil. In Proceedings of the Eleventh International Conference on Machine Learning. July 10-13, 1994, Rutgers, NJ
  


• "Linkability: Examining Causal Link Commitments in Partial-Order Planning", Jim Blythe, Manuela Veloso. In Proceedings of the 2nd Conference on AI Planning Systems, 1994
  


• "The Need for Different Domain-Independent Heuristics", Peter Stone, Jim Blythe, Manuela Veloso. In Proceedings of the 2nd Conference on AI Planning Systems, 1994
  


• "Handbook of Evaluation for the ARPA/Rome Lab Planning Initiative", Paul Cohen, Tom Dean, Yolanda Gil, Matt Ginsberg, Lou Hoebel. In 1994
  


• "Integrating Reactive and Deliberative Planning in a Household Robot", W. Scott Reilly, Jim Blythe. In Proceedings of the AAAI Fall Symposium on Instantiating Real-World Agents, 1993
  


• "Learning New Planning Operators by Exploration and Experimentation", Yolanda Gil. In Proceedings of the AAAI Workshop on Learning Action Models, Washington, DC, July 1993
  


• "Efficient Domain-Independent Experimentation", Yolanda Gil. In Proceedings of the Tenth International Conference on Machine Learning, Amherst, MA, June 1993
  


• ""An Analysis of Search Techniques for a Totally-ordered Nonlinear Planner"", Manuela Veloso, Jim Blythe. In Proceedings of the 1st Conference on AI Planning Systems, 1992
  


• ""Planning and Learning in PRODIGY: Overview of an Integrated Architecture"", Jaime Carbonell, Oren Etzioni, Yolanda Gil, Robert Joseph, Craig Knoblock, Steven Minton, Manuela Veloso. In Goal-Driven Learning, Aswin Ram and David Leake (Eds)
  


• ""Acquiring Domain Knowledge for Planning by Experimentation"", Yolanda Gil. In Ph.D. Thesis, School of Computer Science, Carnegie Mellon University, Pittsburgh PA 15213. August 1992
  


• "Learning by Experimentation: The Operator Refinement Method", Yolanda Gil, Jaime Carbonell. In Machine Learning: An Artificial Intelligence Approach, Volume III, Michalski, R. S. and Kodratoff, Y. (Eds.), Morgan Kaufmann, San Mateo, CA, 1990
  


• ""Explanation-Based Learning: A Problem-Solving Perspective"", Steve Minton, Jaime G. Carbonell, Craig A. Knoblock, Daniel R. Kuokka, Oren Etzioni, Yolanda Gil. In Artificial Intelligence, Volume 40, Number 1/3, September 1989
  


• ""On Becoming Reactive"", Tom Mitchell, Jim Blythe. In Proceedings of the International Conference on Machine Learning, 1989
  


• ""Constraining Search in a Hierarchical, Discriminative Learning System"", Jim Blythe. In Proceedings of the European Conference on Artificial Intelligence, 1988
  


• ""Generalization and Noise"", Yves Kodratoff, Jim Blythe, Michel Manago. In International Journal of Man-Machine Studies, 1987
  


• ""An experimental protocol for gathering examples for empirical learning"", Jim Blythe, Patrick Corsi, David Needham. In Proceedings of the First European Workshop on Knowledge Acquisition, 1987
  


• "A Representation and Library for Objectives in Air Campaign Plans", Andre Valente, William R. Swartout, Yolanda Gil